A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7030395



Internal ID10026268
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:188865486..189037004hg38UCSC Ensembl
Innerchr4:189786640..189958158hg19UCSC Ensembl
Innerchr4:190023634..190195152hg18UCSC Ensembl
Cytoband4q35.2
Allele length
AssemblyAllele length
hg38171519
hg19171519
hg18171519
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763831
Supporting Variants
SamplesSW_1468
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7030395
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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