A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7027455



Internal ID10354206
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:75489613..75547095hg38UCSC Ensembl
Innerchr3:75538764..75596246hg19UCSC Ensembl
Innerchr3:75621454..75678936hg18UCSC Ensembl
Cytoband3p12.3
Allele length
AssemblyAllele length
hg3857483
hg1957483
hg1857483
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763755
Supporting Variants
SamplesSW_0160
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7027455
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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