A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7026603



Internal ID9993723
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:15735286..15925481hg38UCSC Ensembl
Innerchr22:16052528..16242677hg19UCSC Ensembl
Innerchr22:14432528..14622677hg18UCSC Ensembl
Cytoband22q11.1
Allele length
AssemblyAllele length
hg38190196
hg19190150
hg18190150
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760727
Supporting Variants
SamplesRW_0220
Known GenesBMS1P17, BMS1P18
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7026603
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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