A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7024761



Internal ID10342885
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:47053411..47145474hg38UCSC Ensembl
Innerchr17:45130777..45222840hg19UCSC Ensembl
Innerchr17:42485776..42577839hg18UCSC Ensembl
Cytoband17q21.32
Allele length
AssemblyAllele length
hg3892064
hg1992064
hg1892064
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760450
Supporting Variants
SamplesRW_0279
Known GenesCDC27
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7024761
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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