A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7024289



Internal ID10022422
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:815775..819470hg38UCSC Ensembl
Innerchr3:857458..861153hg19UCSC Ensembl
Innerchr3:832458..836153hg18UCSC Ensembl
Cytoband3p26.3
Allele length
AssemblyAllele length
hg383696
hg193696
hg183696
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763731
Supporting Variants
SamplesSW_1290
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7024289
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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