A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7024156



Internal ID10364040
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:242011715..242095518hg38UCSC Ensembl
Innerchr2:242953866..243037669hg19UCSC Ensembl
Innerchr2:242602539..242686342hg18UCSC Ensembl
Cytoband2q37.3
Allele length
AssemblyAllele length
hg3883804
hg1983804
hg1883804
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763646
Supporting Variants
SamplesSW_1093
Known GenesLOC728323
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7024156
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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