A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7023347



Internal ID10341604
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:62168900..62174085hg38UCSC Ensembl
Innerchr15:62461099..62466284hg19UCSC Ensembl
Innerchr15:60248391..60253576hg18UCSC Ensembl
Cytoband15q22.2
Allele length
AssemblyAllele length
hg385186
hg195186
hg185186
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760391
Supporting Variants
SamplesRW_0250
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7023347
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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