A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7021839



Internal ID10002441
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr14:18625765..19955213hg38UCSC Ensembl
Innerchr14:19402242..20423372hg19UCSC Ensembl
Innerchr14:18472242..19493212hg18UCSC Ensembl
Cytoband14q11.1
Allele length
AssemblyAllele length
hg381329449
hg191021131
hg181020971
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760334
Supporting Variants
SamplesRW_0607
Known GenesBMS1P17, BMS1P18, LOC642426, OR11H2, OR4K1, OR4K2, OR4K5, OR4M1, OR4N2, OR4Q3, POTEG, POTEM
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7021839
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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