A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7021755



Internal ID10373922
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:192354778..192455027hg38UCSC Ensembl
Innerchr2:193219504..193319753hg19UCSC Ensembl
Innerchr2:192927749..193027998hg18UCSC Ensembl
Cytoband2q32.3
Allele length
AssemblyAllele length
hg38100250
hg19100250
hg18100250
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763038
Supporting Variants
SamplesSW_1539
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7021755
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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