A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7021710



Internal ID10023171
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:187254894..187277358hg38UCSC Ensembl
Innerchr2:188119621..188142085hg19UCSC Ensembl
Innerchr2:187827866..187850330hg18UCSC Ensembl
Cytoband2q32.1
Allele length
AssemblyAllele length
hg3822465
hg1922465
hg1822465
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763652
Supporting Variants
SamplesSW_1327
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7021710
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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