A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7021581



Internal ID10345846
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr13:57184136..57215875hg38UCSC Ensembl
Innerchr13:57758270..57790009hg19UCSC Ensembl
Innerchr13:56656271..56688010hg18UCSC Ensembl
Cytoband13q21.1
Allele length
AssemblyAllele length
hg3831740
hg1931740
hg1831740
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760317
Supporting Variants
SamplesRW_0522
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7021581
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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