A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7021425



Internal ID10350238
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr13:56393231..56433908hg38UCSC Ensembl
Innerchr13:56967365..57008042hg19UCSC Ensembl
Innerchr13:55865366..55906043hg18UCSC Ensembl
Cytoband13q21.1
Allele length
AssemblyAllele length
hg3840678
hg1940678
hg1840678
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760323
Supporting Variants
SamplesRW_0634
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7021425
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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