A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7021073



Internal ID9999973
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:99579767..99628594hg38UCSC Ensembl
Innerchr12:99973545..100022372hg19UCSC Ensembl
Innerchr12:98497676..98546503hg18UCSC Ensembl
Cytoband12q23.1
Allele length
AssemblyAllele length
hg3848828
hg1948828
hg1848828
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760257
Supporting Variants
SamplesRW_0541
Known GenesANKS1B
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7021073
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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