A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7020960



Internal ID10342919
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:61038551..61054483hg38UCSC Ensembl
Innerchr12:61432332..61448264hg19UCSC Ensembl
Innerchr12:59718599..59734531hg18UCSC Ensembl
Cytoband12q14.1
Allele length
AssemblyAllele length
hg3815933
hg1915933
hg1815933
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760230
Supporting Variants
SamplesRW_0281
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7020960
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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