A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7020863



Internal ID10343169
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:33146857..33156137hg38UCSC Ensembl
Innerchr12:33299791..33309071hg19UCSC Ensembl
Innerchr12:33191058..33200338hg18UCSC Ensembl
Cytoband12p11.1
Allele length
AssemblyAllele length
hg389281
hg199281
hg189281
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760238
Supporting Variants
SamplesRW_0292
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7020863
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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