A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7020815



Internal ID9997487
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:31125097..31256945hg38UCSC Ensembl
Innerchr12:31278031..31409879hg19UCSC Ensembl
Innerchr12:31169298..31301146hg18UCSC Ensembl
Cytoband12p11.21
Allele length
AssemblyAllele length
hg38131849
hg19131849
hg18131849
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760232
Supporting Variants
SamplesRW_0328
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7020815
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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