A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7019531



Internal ID10346023
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:18927525..18950813hg38UCSC Ensembl
Innerchr11:18949072..18972360hg19UCSC Ensembl
Innerchr11:18905648..18928936hg18UCSC Ensembl
Cytoband11p15.1
Allele length
AssemblyAllele length
hg3823289
hg1923289
hg1823289
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760214
Supporting Variants
SamplesRW_0526
Known GenesMRGPRX1
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7019531
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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