A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7018779



Internal ID10343410
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:67586608..67717021hg38UCSC Ensembl
Innerchr10:69346366..69476779hg19UCSC Ensembl
Innerchr10:69016372..69146785hg18UCSC Ensembl
Cytoband10q21.3
Allele length
AssemblyAllele length
hg38130414
hg19130414
hg18130414
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760136
Supporting Variants
SamplesRW_0302
Known GenesCTNNA3
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7018779
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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