A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7018716



Internal ID10333868
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:58080420..58132097hg38UCSC Ensembl
Innerchr10:59840180..59891858hg19UCSC Ensembl
Innerchr10:59510186..59561864hg18UCSC Ensembl
Cytoband10q21.1
Allele length
AssemblyAllele length
hg3851678
hg1951679
hg1851679
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760109
Supporting Variants
SamplesRW_0060
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7018716
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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