A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7018070



Internal ID10003271
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:114051846..114340988hg38UCSC Ensembl
Innerchr9:116814126..117103268hg19UCSC Ensembl
Innerchr9:115853947..116143089hg18UCSC Ensembl
Cytoband9q32
Allele length
AssemblyAllele length
hg38289143
hg19289143
hg18289143
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2761285
Supporting Variants
SamplesRW_0626
Known GenesAKNA, AMBP, COL27A1, KIF12, MIR455, ORM1, ORM2, ZNF618
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7018070
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer