A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7018025



Internal ID10345103
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:104607598..104615150hg38UCSC Ensembl
Innerchr9:107369879..107377431hg19UCSC Ensembl
Innerchr9:106409700..106417252hg18UCSC Ensembl
Cytoband9q31.1
Allele length
AssemblyAllele length
hg387553
hg197553
hg187553
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2761260
Supporting Variants
SamplesRW_0502
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7018025
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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