A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7016389



Internal ID10009629
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:97180592..97211436hg38UCSC Ensembl
Innerchr2:97846329..97877173hg19UCSC Ensembl
Innerchr2:97210056..97240900hg18UCSC Ensembl
Cytoband2q11.2
Allele length
AssemblyAllele length
hg3830845
hg1930845
hg1830845
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763630
Supporting Variants
SamplesSW_0375
Known GenesANKRD36
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7016389
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer