A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7015892



Internal ID9988082
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:7329110..7409843hg38UCSC Ensembl
Innerchr8:7186632..7267365hg19UCSC Ensembl
Innerchr8:7174042..7254775hg18UCSC Ensembl
Cytoband8p23.1
Allele length
AssemblyAllele length
hg3880734
hg1980734
hg1880734
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2761169
Supporting Variants
SamplesRW_0085
Known GenesFAM66B, USP17L1P, USP17L4, ZNF705G
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7015892
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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