A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7015881



Internal ID9991111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:7296545..7987063hg38UCSC Ensembl
Innerchr8:7154067..7844585hg19UCSC Ensembl
Innerchr8:7141477..7881995hg18UCSC Ensembl
Cytoband8p23.1
Allele length
AssemblyAllele length
hg38690519
hg19690519
hg18740519
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2761169
Supporting Variants
SamplesRW_0167
Known GenesDEFB103A, DEFB103B, DEFB104A, DEFB104B, DEFB105A, DEFB105B, DEFB106A, DEFB106B, DEFB107A, DEFB107B, DEFB109P1B, DEFB4A, DEFB4B, FAM66B, FAM66E, FAM90A10P, FAM90A7P, PRR23D1, PRR23D2, SPAG11A, SPAG11B, USP17L1P, USP17L3, USP17L4, USP17L8, ZNF705B, ZNF705G
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7015881
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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