A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7015122



Internal ID10366505
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:81976082..82093303hg38UCSC Ensembl
Innerchr2:82203206..82320427hg19UCSC Ensembl
Innerchr2:82056717..82173938hg18UCSC Ensembl
Cytoband2p12
Allele length
AssemblyAllele length
hg38117222
hg19117222
hg18117222
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763645
Supporting Variants
SamplesSW_1184
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7015122
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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