A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7014303



Internal ID10345234
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:146908321..146939336hg38UCSC Ensembl
Innerchr6:147229457..147260472hg19UCSC Ensembl
Innerchr6:147271150..147302165hg18UCSC Ensembl
Cytoband6q24.3
Allele length
AssemblyAllele length
hg3831016
hg1931016
hg1831016
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760996
Supporting Variants
SamplesRW_0505
Known GenesSTXBP5-AS1
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7014303
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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