A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7014243



Internal ID10338148
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:109970607..109973021hg38UCSC Ensembl
Innerchr6:110291810..110294224hg19UCSC Ensembl
Innerchr6:110398503..110400917hg18UCSC Ensembl
Cytoband6q21
Allele length
AssemblyAllele length
hg382415
hg192415
hg182415
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2761027
Supporting Variants
SamplesRW_0175
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7014243
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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