A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7013972



Internal ID10335343
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:84430460..84438344hg38UCSC Ensembl
Innerchr6:85140178..85148062hg19UCSC Ensembl
Innerchr6:85196897..85204781hg18UCSC Ensembl
Cytoband6q14.3
Allele length
AssemblyAllele length
hg387885
hg197885
hg187885
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760994
Supporting Variants
SamplesRW_0101
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7013972
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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