A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7013846



Internal ID10350468
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:78147549..78336944hg38UCSC Ensembl
Innerchr6:78857266..79046661hg19UCSC Ensembl
Innerchr6:78913985..79103380hg18UCSC Ensembl
Cytoband6q14.1
Allele length
AssemblyAllele length
hg38189396
hg19189396
hg18189396
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760997
Supporting Variants
SamplesRW_0640
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7013846
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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