A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7012686



Internal ID10336323
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:18597093..18662999hg38UCSC Ensembl
Innerchr5:18597202..18663108hg19UCSC Ensembl
Innerchr5:18632959..18698865hg18UCSC Ensembl
Cytoband5p14.3
Allele length
AssemblyAllele length
hg3865907
hg1965907
hg1865907
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760971
Supporting Variants
SamplesRW_0123
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7012686
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer