A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7011701



Internal ID10348219
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:120602424..120626306hg38UCSC Ensembl
Innerchr4:121523579..121547461hg19UCSC Ensembl
Innerchr4:121743029..121766911hg18UCSC Ensembl
Cytoband4q27
Allele length
AssemblyAllele length
hg3823883
hg1923883
hg1823883
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760863
Supporting Variants
SamplesRW_0586
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7011701
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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