A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7010522



Internal ID10371293
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:17039825..17056694hg38UCSC Ensembl
Innerchr2:17221092..17237961hg19UCSC Ensembl
Innerchr2:17084573..17101442hg18UCSC Ensembl
Cytoband2p24.2
Allele length
AssemblyAllele length
hg3816870
hg1916870
hg1816870
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763621
Supporting Variants
SamplesSW_1397
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7010522
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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