A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7009830



Internal ID10335208
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:176090558..176147262hg38UCSC Ensembl
Innerchr3:175808346..175865050hg19UCSC Ensembl
Innerchr3:177291040..177347744hg18UCSC Ensembl
Cytoband3q26.31
Allele length
AssemblyAllele length
hg3856705
hg1956705
hg1856705
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760787
Supporting Variants
SamplesRW_0098
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7009830
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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