A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7008906



Internal ID10348140
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:14345465..14349620hg38UCSC Ensembl
Innerchr3:14386965..14391120hg19UCSC Ensembl
Innerchr3:14361969..14366124hg18UCSC Ensembl
Cytoband3p25.1
Allele length
AssemblyAllele length
hg384156
hg194156
hg184156
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760801
Supporting Variants
SamplesRW_0584
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7008906
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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