A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7008724



Internal ID10331789
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:234655658..234661964hg38UCSC Ensembl
Innerchr2:235564302..235570608hg19UCSC Ensembl
Innerchr2:235229041..235235347hg18UCSC Ensembl
Cytoband2q37.1
Allele length
AssemblyAllele length
hg386307
hg196307
hg186307
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760554
Supporting Variants
SamplesRW_0006
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7008724
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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