A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7008670



Internal ID10339510
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:226092047..226102146hg38UCSC Ensembl
Innerchr2:226956763..226966862hg19UCSC Ensembl
Innerchr2:226665007..226675106hg18UCSC Ensembl
Cytoband2q36.3
Allele length
AssemblyAllele length
hg3810100
hg1910100
hg1810100
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760548
Supporting Variants
SamplesRW_0201
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7008670
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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