A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7007668



Internal ID9992332
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:61163656..61167716hg38UCSC Ensembl
Innerchr2:61390791..61394851hg19UCSC Ensembl
Innerchr2:61244295..61248355hg18UCSC Ensembl
Cytoband2p15
Allele length
AssemblyAllele length
hg384061
hg194061
hg184061
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760616
Supporting Variants
SamplesRW_0190
Known GenesC2orf74
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7007668
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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