A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7005391



Internal ID10333890
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:60417894..60503266hg38UCSC Ensembl
Innerchr1:60883566..60968938hg19UCSC Ensembl
Innerchr1:60656154..60741526hg18UCSC Ensembl
Cytoband1p32.1
Allele length
AssemblyAllele length
hg3885373
hg1985373
hg1885373
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2762144
Supporting Variants
SamplesRW_0061
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7005391
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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