A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7004501



Internal ID10007598
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:18745406..18822597hg38UCSC Ensembl
Innerchr22:18732919..18810110hg19UCSC Ensembl
Innerchr22:17112919..17190110hg18UCSC Ensembl
Cytoband22q11.21
Allele length
AssemblyAllele length
hg3877192
hg1977192
hg1877192
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763706
Supporting Variants
SamplesSW_0165
Known GenesGGT3P
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7004501
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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