A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7001284



Internal ID10357351
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:78337601..78405718hg38UCSC Ensembl
Innerchr16:78371498..78439615hg19UCSC Ensembl
Innerchr16:76928999..76997116hg18UCSC Ensembl
Cytoband16q23.1
Allele length
AssemblyAllele length
hg3868118
hg1968118
hg1868118
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2762165
Supporting Variants
SamplesSW_0603
Known GenesWWOX
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7001284
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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