A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7001240



Internal ID10007737
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:70117624..70164493hg38UCSC Ensembl
Innerchr16:70151527..70198396hg19UCSC Ensembl
Innerchr16:68709028..68755897hg18UCSC Ensembl
Cytoband16q22.1
Allele length
AssemblyAllele length
hg3846870
hg1946870
hg1846870
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2762188
Supporting Variants
SamplesSW_0172
Known GenesPDPR
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7001240
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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