A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7001059



Internal ID10024318
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:35232200..35526596hg38UCSC Ensembl
Innerchr16:34466571..34760967hg19UCSC Ensembl
Innerchr16:34324072..34618468hg18UCSC Ensembl
Cytoband16p11.1
Allele length
AssemblyAllele length
hg38294397
hg19294397
hg18294397
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2762322
Supporting Variants
SamplesSW_1381
Known GenesLOC100130700, LOC146481, LOC283914
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7001059
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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