A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7000865



Internal ID10016248
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32542856..32623443hg38UCSC Ensembl
Innerchr16:32554177..32634764hg19UCSC Ensembl
Innerchr16:32461678..32542265hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3880588
hg1980588
hg1880588
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2762243
Supporting Variants
SamplesSW_1056
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7000865
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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