A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7000590



Internal ID10025641
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:18564935..18771852hg38UCSC Ensembl
Innerchr16:18576257..18783174hg19UCSC Ensembl
Innerchr16:18483758..18690675hg18UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg38206918
hg19206918
hg18206918
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2762176
Supporting Variants
SamplesSW_1438
Known GenesABCC6P1
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7000590
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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