A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6999669



Internal ID10025422
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:24137296..24189385hg38UCSC Ensembl
Innerchr15:24382443..24434532hg19UCSC Ensembl
Innerchr15:21933536..21985625hg18UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3852090
hg1952090
hg1852090
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2761710
Supporting Variants
SamplesSW_1430
Known GenesPWRN2
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6999669
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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