A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6998601



Internal ID10360184
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr14:46372132..46405397hg38UCSC Ensembl
Innerchr14:46841335..46874600hg19UCSC Ensembl
Innerchr14:45911085..45944350hg18UCSC Ensembl
Cytoband14q21.2
Allele length
AssemblyAllele length
hg3833266
hg1933266
hg1833266
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2761411
Supporting Variants
SamplesSW_0819
Known GenesLINC00871
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6998601
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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