A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6998281



Internal ID10020681
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr14:18639714..18976194hg38UCSC Ensembl
Innerchr14:19416191..19562139hg19UCSC Ensembl
Innerchr14:18486191..18632139hg18UCSC Ensembl
Cytoband14q11.1
Allele length
AssemblyAllele length
hg38336481
hg19145949
hg18145949
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2761533
Supporting Variants
SamplesSW_1220
Known GenesPOTEG
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6998281
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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