A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6997197



Internal ID10020269
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:31104761..31259735hg38UCSC Ensembl
Innerchr12:31257695..31412669hg19UCSC Ensembl
Innerchr12:31148962..31303936hg18UCSC Ensembl
Cytoband12p11.21
Allele length
AssemblyAllele length
hg38154975
hg19154975
hg18154975
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2760888
Supporting Variants
SamplesSW_1203
Known GenesDDX11
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6997197
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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