A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6994427



Internal ID10016099
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:13014550..13016840hg38UCSC Ensembl
Innerchr10:13056550..13058840hg19UCSC Ensembl
Innerchr10:13096556..13098846hg18UCSC Ensembl
Cytoband10p13
Allele length
AssemblyAllele length
hg382291
hg192291
hg182291
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764257
Supporting Variants
SamplesSW_1051
Known GenesCCDC3
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6994427
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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