A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6993602



Internal ID10361594
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:11839399..12316206hg38UCSC Ensembl
Innerchr9:11839399..12316206hg19UCSC Ensembl
Innerchr9:11829399..12306206hg18UCSC Ensembl
Cytoband9p23
Allele length
AssemblyAllele length
hg38476808
hg19476808
hg18476808
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764137
Supporting Variants
SamplesSW_0891
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6993602
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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